rs29875135 SNP Detail

Summary

• ID
  rs29875135
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:52747736 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATCTT TACATGTAAC CCCCCCCCCC
  M
  AAAAGAATTA ACAGTCCTGT GGATT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39623712	mCV23703081	ABI	CRAMUS_MOUSE	f	SNP	A	C	A
ss147124980	ENSMUSSNP3292257	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		A
ss325623452	CHEV_18_52774318	CHEVERUD	SCREENING_POP	f	SNP				C	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29875135					SNP	A	C	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:52747736 () rs orientation: forward

Symbol	Name	Function Class
Rr354446	regulatory region 354446	within coordinates
Tssr151055	transcription start site region 151055	1244 bp upstream
Tssr151056	transcription start site region 151056	1360 bp upstream
Zfp474	zinc finger protein 474	1251 bp upstream