rs29875620 SNP Detail

Summary

• ID
  rs29875620
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:86487139 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAAGCATCAC TCTTGAATTT AAAGAAGTCA AGACACAGTA
  GTACAAAGAC GTCATAGATT CTAGTTCAAA CTTGTGCATA TCATGATTAA TCCTAAGGAA
  K
  AACTGTATTG CATTAGATGA ACAGTAACTG GTAGTTTCTC TTGTGCACAA ACATCCCATG
  GATTACACAA GATCAGATGC TTCATTATCT TTTGCCTAC                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45373166	mCV23001907	ABI	CRAMUS_MOUSE	f	SNP	T	T	G	T	G
ss146862837	ENSMUSSNP536015	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	G
ss320378748	CHEV_2_86496952	CHEVERUD	SCREENING_POP	f	SNP						G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29875620					SNP	T	T	G	T	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:86487139 () rs orientation: forward

Symbol	Name	Function Class
Or8k38	olfactory receptor family 8 subfamily K member 38	mRNA-UTR