rs29876281 SNP Detail

Summary

• ID
  rs29876281
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:19958271 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAGTTAGAA GAGAGAATGT
  CAGGCATATA AGATATGATA GAAAAAAATT GAAATATGGG CAAAGTAAAT GTTACATCTA
  AAATGTTTCT AATATAAAAC ATCTAGGAAA TTTGGGGCAC TATGAAAAGA TCAACACTAA
  GTATTAATAG GAATAGAAAA AAAGGCAAGA TCCTCAGTTC AAAGGCACAG AAAATATCAT
  Y
  AAAATCATAG AAAAGTTTTC CAAACCTAAG ACACATACAA GCTTAAAGAA CACAAAATAG
  ATTGAACCAG AAAACAAAAT CATATAGCCA CATAATAATT AATACACTCA CTGTATGGAA
  CAAAGAACAC ATATTAAAAC TGCAAGGGAA AAAGGTCAGG CAACATATAA AATGTATTTA
  TATATTTGAA TTATACCTGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45869378	mCV24720411	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss133058559	ENSMUSSNP3224739	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29876281					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:19958271 () rs orientation: forward

Symbol	Name	Function Class
Rr379021	regulatory region 379021	within coordinates