rs29878752 SNP Detail

Summary

• ID
  rs29878752
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:129715851 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATTTGGGAA GTGCACCCGG
  GGTCTTGCCA GGAAGTGCTT GGTTGCAAAC CTCATTCTAA TCTTAATTCA CCTTTACAGG
  TGTGGATGAT TTCTGCTCAC TGTGTCCCCC AAGGCCCCTT CAAGGGGTCT CTACCATTTC
  CAAGATTCCT TTCCTGACTG TGACATTTGG TTCTGGCCCT GGACATCAGG GGGGGGGGGG
  R
  GTTCTAGCCA GATTTGGAAA AGGAAGGAGG GAAGAATTGG TAAATTGACT TAGGCAAGTA
  AGATAATTTG GCTCTTTACC TCTCCAAGAC TGAGTTTCAG AATTATCAGC GAGGTTTGGC
  AGAATTTCTG TGCAAGTGTT ATTCTTATAG TCACAGGTTC TGAATAAGAT GTGAAAGGCA
  CTGGCTGTCA GAACGACCTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45373537	mCV25265700	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss147591264	ENSMUSSNP4234230	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
ss320505896	CHEV_2_129699667	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29878752					SNP	G	A	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:129715851 () rs orientation: forward

Symbol	Name	Function Class
Gm75517	predicted gene, 75517	1934 bp upstream
Rr564988	regulatory region 564988	within coordinates
Rr564989	regulatory region 564989	199 bp distal