rs29881236 SNP Detail

Summary

• ID
  rs29881236
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:97776789 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AAAGCCTAAG TAGGGGCTGA GAGATGGCTC AAGGGTTAAG CACTCTTGCT GTTCCTGTAG
  AGGAGTTGGT CCCTTGGTAC CAGAAGTCTC ATGGTGGCTC AAAACCGTAC ATAACTCCTG
  TCTAGGGGGT CCACTCAGTG CCTTCTTCTG GCCTTCACAG GCTTCGCATA CCCATGTACT
  GCACTCGCAC ACATGCAGGC AAAACACTCA TACACATACA AATAAAAATA AATGATTTTA
  CAGAGAGAGG GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA
  R
  AGAAGGAAGG AAGGAAGGAA GGAAGAAAGA AAGAAATCTA AATTCACCTG CTCCCACAGA
  TCGAGCAGAG GGCAGGGATG GGTATACAGT ACCTAGTTTT CCACAGGAAG CAGAATGTGG
  AGGAGAGACA AGTGGGTGGA CAAGCTGGCC TTGAGGTAAG CAATAGACCT TCAGTAATTC
  ATAAGCTCGA GGTGCAGAAT ACTGCCTGAT AAGATACGGG GCTTGGACAC AATCACTGTT
  TATTGTGCAC AGGATCTTCC TCTTCTTTTT TGCAGAGAAA AATCTTACAC TGAATCCTGC
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss39128656	mCV24844187	ABI	CRAMUS_MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs29881236					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:97776789 () rs orientation: forward

Symbol	Name	Function Class
D13Mit259	DNA segment, Chr 13, Massachusetts Institute of Technology 259	1199 bp proximal
Gm61494	predicted gene, 61494	within coordinates
Rr484414	regulatory region 484414	1267 bp distal