rs29886926 SNP Detail

Summary

• ID
  rs29886926
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:86426000 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCCA TTCTCAGCTC AGAGACCAGT
  R
  GATGGCACAG AATGTGGATG TTCAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss46349782	mCV24274683	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss136757188	ENSMUSSNP6885455	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
ss323056641	CHEV_9_86437554	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs29886926					SNP	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:86426000 () rs orientation: forward

Symbol	Name	Function Class
Dop1a	DOP1 leucine zipper like protein A	within coordinates
Rr211041	regulatory region 211041	200 bp distal
Tssr86395	transcription start site region 86395	1283 bp upstream
Tssr86396	transcription start site region 86396	1309 bp upstream