rs29887637 SNP Detail

Summary

• ID
  rs29887637
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:86427873 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCCAG TCACAACCAT TTCTATGTCT
  W
  ATTTGGAACT GTGCTGCAGA CAGGG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46351498	mCV24274708	ABI	CRAMUS_MOUSE	f	SNP	A	T	T	A
ss136757212	ENSMUSSNP5809641	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		A
ss323056646	CHEV_9_86439427	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29887637					SNP	A	T	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:86427873 () rs orientation: forward

Symbol	Name	Function Class
D9Mit111	DNA segment, Chr 9, Massachusetts Institute of Technology 111	693 bp proximal
Dop1a	DOP1 leucine zipper like protein A	within coordinates
Gm17530	predicted gene, 17530	862 bp downstream
Tssr86395	transcription start site region 86395	578 bp downstream
Tssr86396	transcription start site region 86396	551 bp downstream