rs29893973 SNP Detail

Summary

• ID
  rs29893973
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:20112056 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACTGACCCT AAAAATTCTA
  CCAGAGAACT CCTAAGCCTG ATAAACAGCT TCACTGAAGT ACCTGGATAT AAAATTAACT
  CAAACAAATC AGTGGCCTTT CTCTAGGCAA AGGATAAACA GGCTGAGAAA GAAATTAGCG
  AAACTGAAAG AACCTAGTGG GGAAACCCCC ACTCAACTCC TGATTCAGCT TGCACCCAAG
  R
  ATCACGAATA GAACACAACA CCGTGATGTA ACAACACAAG GTATTTTAAT GGTGGAGCTC
  CGGGTCGAAA CATATCTCAC ACAGGAGACA GTGGATTCGA CCACAAGGCT TGGAAGCTAA
  GGGTTTTTAG AGAAGAAGGT ATATCCTTTT GTTTTAGGAT AAAATGTTCT GTAAATCTCT
  ATTAAATCCA TTTGTTTCAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46351578	mCV24475995	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss136221867	ENSMUSSNP3107162	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29893973					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:20112056 () rs orientation: forward

Symbol	Name	Function Class
Rr383044	regulatory region 383044	858 bp upstream