rs29895939 SNP Detail

Summary

• ID
  rs29895939
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:86425833 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGAGT CTGTACTGTG TATTCCACAT
  R
  GCTTTCTCAT CTGGAGAAAG GGTGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46352873	mCV24274672	ABI	CRAMUS_MOUSE	f	SNP	A	A		A	G
ss136757185	ENSMUSSNP1596495	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29895939					SNP	A	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:86425833 () rs orientation: forward

Symbol	Name	Function Class
Dop1a	DOP1 leucine zipper like protein A	within coordinates
Rr211041	regulatory region 211041	33 bp distal
Tssr86395	transcription start site region 86395	1450 bp upstream
Tssr86396	transcription start site region 86396	1476 bp upstream