rs29896965 SNP Detail

Summary

• ID
  rs29896965
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:77183782 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGACCAAGT CTCTGAACCT
  GTAAGCAGCC CCAATGAAAT GTTGTCCTTA AAAAAAAAGT TACTAAGACG AAAGTGAACT
  AAAATTTTCT GTACACGCTC ATAGTAAGTG AATGAAGGGA AGAGTACATT AGAATTAAAC
  TTTGGATAGT TTGGGTTAGA GAGAAGATGT CTAAGAGAAG GGGCTGAATA AGGAGTTGAA
  Y
  GTAAGTCTAG TTTTCAATTA CAAGGTGTGA AGACATAAAT AGTGCAGACA AAATACAAGG
  AGTGTTTATA GCCTTGAGAT TGAGTTATAT TGTATAACCA AGTAATAAAA GTAGTTAGAA
  ATCAATCATA TGGGAGGACA AAGGTTGAAA ACCACAGTGT GCCTCCTGGA CACCTTCAGT
  AGCTCAGCTT GTTGGATGCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss46352580	mCV22299546	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss136655326	ENSMUSSNP4332379	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
ss323012061	CHEV_9_77124307	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs29896965					SNP	T	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:77183782 () rs orientation: forward

Symbol	Name	Function Class
Gm53504	predicted gene, 53504	1890 bp upstream
Mlip	muscular LMNA-interacting protein	within coordinates
Rr683300	regulatory region 683300	204 bp proximal