rs29897075 SNP Detail

Summary

• ID
  rs29897075
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:119501889 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTTT GTTATAAAAC ACTGCAAGTG
  R
  GCTTCAACAG TAAGCCAAAA CTGAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss39129843	mCV23813674	ABI	CRAMUS_MOUSE	f	SNP	G	G	A		G
ss52698263	NES15540369	PERLEGEN	MM_PANEL2	f	SNP	G		A	A	G	A	A		G	A	A	G		A
ss145469365	ENSMUSSNP1976857	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A		G
ss324555686	CHEV_13_120154160	CHEVERUD	SCREENING_POP	f	SNP								A					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs29897075					SNP	G	G	A	A	G	A	A	A	G	A	A	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52698263	NES15540369	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:119501889 () rs orientation: forward

Symbol	Name	Function Class
Nnt	nicotinamide nucleotide transhydrogenase	within coordinates
Rr270671	regulatory region 270671	889 bp distal
Rr285835	regulatory region 285835	1574 bp distal