rs29898526 SNP Detail

Summary

• ID
  rs29898526
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:32918791 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGTTCCAATT TTTGAAAAGA AACGGCATTC TTCAGTCTTC
  TCCAGCAGAA AAAAAAGCCA GCATAGCATA ATGTTGATCT AAACACCATC TTTGGCTGTT
  Y
  CTTGGTGACA AAAGCCTTTT CTTTCCTTCC TCCCTCCCTC CTTTTCTCTT CCTCCCTCCC
  TCCCTCCCTC CCTCCCTCCC TCCCTCCCTC CCTCCCTCCC                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ
ss49080512	NES12441829	PERLEGEN	MM_PANEL2	f	SNP	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	AKR/J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ
rs29898526					SNP	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49080512	NES12441829	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:32918791 () rs orientation: forward

Symbol	Name	Function Class
Mylk4	myosin light chain kinase family, member 4	within coordinates
Rr278925	regulatory region 278925	16 bp distal