rs29899436 SNP Detail

Summary

• ID
  rs29899436
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:32912761 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTCTCTTA GCTCTGTGGA
  ATTCCTCTGA ACAAATTCTA TCTTGTCTTG TCTTTCCACG TGACATATGA CACAACTCCT
  CTGCACTTCT AATGCACTGG TCTTCTCTGA ATTTTTCTTG TTAAGTTTGG TAATCTTTTC
  TTTCTCGGAA GAGAATTGGT CATTCTGGTC AGTTTTCTCT AGAAGTCACA GAACACAAAA
  M
  ATTTTAATGA AGAATGCACA TGGTCACTAA TTTTGGCTTT ATTTAATGGC ACCTCTTTTC
  TGGCCCCTTT TTAACATTAG ATTTAAGCTT TCAGAAGCAA AGCAGAATAA AATATACCCA
  GCTGACTGAT AACTGCATAT CAAAATATTT TATTTGTCAT GGTTATGGCC AAACCCAGTC
  AGATAAAGAT ATTAATAAAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49080522	NES12442238	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	C		A	A	C	A
ss148850661	ENSMUSSNP1585889	ENSEMBL	ENSEMBL_Sanger	f	SNP		A						A				C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29899436					SNP	A	A	A	A	A	A	A	A	A	A	C	C	A	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49080522	NES12442238	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:32912761 () rs orientation: forward

Symbol	Name	Function Class
2310045N14Rik	RIKEN cDNA 2310045N14 gene	1806 bp upstream
Mylk4	myosin light chain kinase family, member 4	within coordinates