rs29899440 SNP Detail

Summary

• ID
  rs29899440
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:32908043 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCTGGTGCTT TGGGCCTGCA GTAGCATGGC ACATCATAGC
  AGCAGAAGAG CTGCACACTT CATGGCAGCA AGGAAGCAAA GGGTAGAAAA GGATGAGAGT
  Y
  GTTTCCACTT CTCCCTTCCA GGACTGGTTG CCTAATTTCA TTCAGATACA CCTCACTTCC
  TAAAGGTGCT GCCATCATCT AATAATGCCA TGGAGTAGCC                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss49080527	NES12442440	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	T	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs29899440					SNP	C	C	C	C	C	C	C	C	C	T	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49080527	NES12442440	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:32908043 () rs orientation: forward

Symbol	Name	Function Class
2310045N14Rik	RIKEN cDNA 2310045N14 gene	1791 bp downstream
Mylk4	myosin light chain kinase family, member 4	within coordinates