rs29900932 SNP Detail

Summary

• ID
  rs29900932
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13305375 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTAGAATAC AATTGGAAAG
  AACTTTAGTG TGTAACAAGA CGCCCTTCCT GCTGGCCCAA CTCTCAGTCT GAAGCAGTCC
  CACAAATCCA GAAGGTACAT AGCTCCCATC CAGACAGACA AACAGCAGAA GCCAGCAGGA
  GCCAGCTCCC ACTTACGGTG TACCAACTTA TGGACAAGTG TGACCTGGCT CAAGGAGTGA
  R
  GTCCAAGGAC TCTTGGGAGA GGCTTTGTTG TGGATGTTTG GAAACCACTT CTACACTATT
  CGGTCAAAAT CACACACAAG ATAAGGCTGC CTCACTAGTC TGTCTACCTG ACATTCACAG
  AGCCCCTTCT GTTACAGGAT GCTAGGCACA GCAAAAGAAG CTGGGAAGTT GACTTCTGCG
  CCCACAGAGC ATCAAGTATG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47394452	NES11492382	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29900932					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47394452	NES11492382	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13305375 () rs orientation: forward

Symbol	Name	Function Class
Adprhl1	ADP-ribosylhydrolase like 1	1213 bp upstream
Dcun1d2	defective in cullin neddylation 1 domain containing 2	588 bp downstream
Rr175514	regulatory region 175514	775 bp distal
Rr186316	regulatory region 186316	1174 bp distal
Tssr80430	transcription start site region 80430	1332 bp upstream
Tssr80431	transcription start site region 80431	1290 bp upstream
Tssr80432	transcription start site region 80432	1256 bp upstream
Tssr80433	transcription start site region 80433	1225 bp upstream
Tssr80434	transcription start site region 80434	1207 bp upstream
Tssr80435	transcription start site region 80435	1187 bp upstream
Tssr80436	transcription start site region 80436	1106 bp upstream