rs29902879 SNP Detail

Summary

• ID
  rs29902879
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:70845242 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AACAC AGTTAAACAT TTAATTCATG
  Y
  GATTGATGGT GGCAGCATAT GAACT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NZW/LacJ	SM/J
ss47893569	NES11943055	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	T		C
ss323358990	CHEV_10_70472160	CHEVERUD	SCREENING_POP	f	SNP									T		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NZW/LacJ	SM/J
rs29902879					SNP	C	C	C	C	C	C	C	T	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47893569	NES11943055	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:70845242 () rs orientation: forward

Symbol	Name	Function Class
Bicc1	BicC family RNA binding protein 1	within coordinates
Gm67932	predicted gene, 67932	1586 bp upstream
Rr220232	regulatory region 220232	242 bp distal
Rr220233	regulatory region 220233	759 bp proximal