rs29902881 SNP Detail

Summary

• ID
  rs29902881
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:70846794 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACTGGGGAT GTCTCTGAGG
  CCAATGAAAT GCTAATGATA TTCAGGGCAT GTAGCAGTCA GTGCTGGGAT TCCATTCCCC
  CAGAGCACGC TGAGACGTGA ACAGTGTATC TCCAATTGCC CTACAGAGGG AGTGGGTGGG
  GTATTTGTTT TTGGGCTCCT TGTGAAGGCT ACCCTTGGAT ACTGAATATA CAGAATCTTC
  W
  TGCACATTCC AGGCTGTTGT TGAGTCAGAA AACATTCCTA TGGGGCCCCC GAAGAGGTGC
  AGCAGATCCG CAGAGACTAA CACTAGATAG GAGGTATCAA TATGCATAGG AAATAGCTAT
  CATGGAGTTA ACGGCACTCA GAAGCTGGTC CCAGGGCAAA GCAACAACAT CATCACCAGC
  ATCATCATCA CCAGCATCAT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47893571	NES11942904	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	A	T	T	A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29902881					SNP	T	T	T	T	T	T	T	T	T	T	A	T	T	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47893571	NES11942904	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:70846794 () rs orientation: forward

Symbol	Name	Function Class
Bicc1	BicC family RNA binding protein 1	within coordinates
Gm67932	predicted gene, 67932	34 bp upstream
Rr220232	regulatory region 220232	1794 bp distal
Rr220233	regulatory region 220233	within coordinates