rs29903215 SNP Detail

Summary

• ID
  rs29903215
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:34256310 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGGAGGTA TTTTTCCTCC
  TAGTAAGATA GTTGCAGACA GAGATGGAGG AGAGCATGTG CGCTAGACTA CAGGGGCCTA
  GAAACATGAA CCAATGCTTA GTGACTTGCA GACTCTCAGC TGTTGTTGCT ATGAACAGAG
  GGAAGGCTAG GCACTCTGCC CAGGCACAGC TTTAAGGTGG GAGCCAGCAG GACACCCTTC
  R
  ATGAAGATCT AAGCTCACCT TGCAGTGCTG AAGATCTAGA TACAGGTCCC AGATCATGAG
  TCCCTCTTAC CTCCTAGGGG AGTGACATCT TTATAGATAC AAACTTCCTT GGACACATAG
  CAAGTGCTTG GCCATCTATG GTTTACAAAT GACATCTATA ACACAATTTT ATCGCCCTCT
  TTTTGGGGAT CATCAGGTGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49577881	NES12876702	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29903215					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49577881	NES12876702	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:34256310 () rs orientation: forward

Symbol	Name	Function Class
Tssr28805	transcription start site region 28805	514 bp upstream