rs29903218 SNP Detail

Summary

• ID
  rs29903218
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:34255975 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAGGTGTTG TAAGATGGCA
  GCTGCATCTC CAGGATCAAC ACAGAGAGGT TTAGGTTTGC AATGGTCCGC TCTAAGGCGG
  TGATCACAGT ACAGCATTTT CTGCATAGAT TTTCCTTTAA GTCACTCAGT CCTTTGCTCC
  TGCCTTTGGT TTAAAACCTT GGTGTTATGT GGCTCATAGA GCCTTGACCA TGATTCTCAA
  S
  CACTGTAGGT CTTTTAGGAG ATGATGTCAA GATCATCCAC CATATGACAT TGCTTTTCTT
  GTCATACGGA AGGCTTAAAC TCACTGCCCG TGCTAATGAC AGACTCCCTC CACAGCGCTC
  TGAGCCACGT CAGAGATGGA GGTATTTTTC CTCCTAGTAA GATAGTTGCA GACAGAGATG
  GAGGAGAGCA TGTGCGCTAG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49577884	NES12876695	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	G	C	G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29903218					SNP	C	C	C	C	C	C	C	C	C	C	G	C	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49577884	NES12876695	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:34255975 () rs orientation: forward

Symbol	Name	Function Class
Tssr28805	transcription start site region 28805	849 bp upstream