rs29903221 SNP Detail

Summary

• ID
  rs29903221
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:34255761 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTGGTAGAG GAGTAAGCCC
  AGTTAGAACA TGAGAAGGCA ACGAAGGAAA AACAACTCGC CAAGAAACAC CCCTCTGTGA
  CGGAGTCCTA CATGTCTTGC TTATCTCACA CAGTTCATCC TTGTGGACGT GAAAAGTGAT
  ACTTTAAATT TGCACACTAA ACAAGCAAGG AAAAGCTTAT GCCAGAGATC ATATCTAGGA
  M
  GAGAAGATGG CTGGGAGGTG TTGTAAGATG GCAGCTGCAT CTCCAGGATC AACACAGAGA
  GGTTTAGGTT TGCAATGGTC CGCTCTAAGG CGGTGATCAC AGTACAGCAT TTTCTGCATA
  GATTTTCCTT TAAGTCACTC AGTCCTTTGC TCCTGCCTTT GGTTTAAAAC CTTGGTGTTA
  TGTGGCTCAT AGAGCCTTGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49577888	NES12876683	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	A	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29903221					SNP	C	C	C	C	C	C	C	C	C	C	A	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49577888	NES12876683	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:34255761 () rs orientation: forward

Symbol	Name	Function Class
Tssr28805	transcription start site region 28805	1063 bp upstream