rs29903592 SNP Detail

Summary

• ID
  rs29903592
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:33111046 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACTAAGCTC AGTACTAATA
  CCGTAGTCTG AGTGGTTGCT GCATGAGAAC CCTCCCCTAG ATAAGCAGCT CAGTGTTTTC
  TCCTCTGTTG GAAGCCCTCC CACTCCAGAG AGCTTCATTT TTCCTTTGGT TATTTGCACA
  AGTGTATTTG TTGGTGTGTG TTGTTGTATG TTCATTCTCA ATCATCACTA GCAGCAGACA
  W
  CACGCTCAAA CAAACTGCCC TGGTGTACTC TTGGTGACAG TTGATTGTCT GGTTCCTGAG
  TCCTTGAGTG AAGCAGAGCT GGGCTGAGGA GGACTCTTGC TCTCAAAGGT CTGCATTTCC
  AGTTGTAGAA ATGCTCTACG CGCCTGCTGT CTCACTGTGT TCTGACTTGG ATTAAAGACA
  GGCGTGTTTT CCTTTTGAAA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49079981	NES12435406	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	T	A	A	T	A
SNP Consensus Information
SNP					Consensus Type	AKR/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29903592					SNP	A	A	A	A	A	A	T	A	A	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49079981	NES12435406	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:33111046 () rs orientation: forward

Symbol	Name	Function Class
Rr476932	regulatory region 476932	1633 bp distal