rs29903825 SNP Detail

Summary

• ID
  rs29903825
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:70846931 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGGTATTTG TTTTTGGGCT
  CCTTGTGAAG GCTACCCTTG GATACTGAAT ATACAGAATC TTCTTGCACA TTCCAGGCTG
  TTGTTGAGTC AGAAAACATT CCTATGGGGC CCCCGAAGAG GTGCAGCAGA TCCGCAGAGA
  CTAACACTAG ATAGGAGGTA TCAATATGCA TAGGAAATAG CTATCATGGA GTTAACGGCA
  Y
  TCAGAAGCTG GTCCCAGGGC AAAGCAACAA CATCATCACC AGCATCATCA TCACCAGCAT
  CATCATCACC AGCACAGGCA AGCAGCCAGT TCCTGGCTCA ATCGAACTGA CATGATCAGC
  TAACTCTAGA AAGTTCCAAG GCTTTCCAAT GCCTACAGAG TAGGGGGGCC TCTCATGGGA
  TCATTGCCCC GCATGGCTTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47893575	NES11942906	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29903825					SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47893575	NES11942906	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:70846931 () rs orientation: forward

Symbol	Name	Function Class
Bicc1	BicC family RNA binding protein 1	within coordinates
Gm67932	predicted gene, 67932	within coordinates
Rr220232	regulatory region 220232	1931 bp distal
Rr220233	regulatory region 220233	131 bp distal