rs29904266 SNP Detail

Summary

• ID
  rs29904266
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:34255354 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACAAGAGTA GTCCAGTTTG
  TCTTAACACC CAGATGTGAA TATGTCTTAG CCCAGTGCCA AGCTCAGCTT AACCCCTAAT
  TCCTGTATGG CGACAGTTGC TATCCTGCTT AGTGGTAATG GACATCCTGT GTGGGCACAA
  ACAATCCCAC CACATATTTT CCTTGAAGGA AAACCACATG GGTGTTTTGG ACACTGCCCT
  R
  AAAGTGTATT CTTCAGCAGG ACTTTAAACA GGACACCAGG ACTATCTCTC CAACAGCCGT
  GCTCAGAGAT TTCACTGTTT CTAGTTGCTG TGGTGACTGA ATCAAAGGTT AAAACCCAAA
  CTGAAACCAA ACCAAAGACC TCATAAAAGG GTGAGTTCCC ATGGGGACAA GACCAAGCTC
  TTAGAGACTA GATTTGAACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49577893	NES12876671	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29904266					SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49577893	NES12876671	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:34255354 () rs orientation: forward

Symbol	Name	Function Class
Tssr28805	transcription start site region 28805	1470 bp upstream