rs29905150 SNP Detail

Summary

• ID
  rs29905150
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:32884082 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCAGAGGAC CCCAAGGAAC
  CATCTTCTTC AGACTAGGAT CATTAGCCAG AATGGTGATG CACTTTCCTG GTAGGGACTA
  GAAAGGGAAG TCGGAAGGGT CTGATAGCCT CCTTCTGTAG CATATTGAGG GAGACAACCC
  TGCCTATTCC AGTTCACTCT GGGAGAGGGA CAAAAAAGAC AGGAGAGGAC TTGAATGGCT
  Y
  TCAACCCCAA GTGTCAGGTC CTTGAGATTT CGCACTAAGA ACTTGTTCCT GATGAAGAAT
  GGGTCCATGA ACACTGATGT GGTTGGTGAA TGCAGCTTCT TCCTTGTGTG AAACAAGTCA
  GTTGACTCAC CTAAAGGGCT AGGCCTGAGA GACTGGGTTC AAGAGGGACA TGATATTACT
  CTAGTGAAAA AACATAAGCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss49080589	NES12443533	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	C	T	C	T	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs29905150					SNP	T	T	T	T	T	C	T	C	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49080589	NES12443533	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:32884082 () rs orientation: forward

Symbol	Name	Function Class
Mylk4	myosin light chain kinase family, member 4	728 bp downstream
Tssr121998	transcription start site region 121998	1608 bp downstream