rs29905152 SNP Detail

Summary

• ID
  rs29905152
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:32883741 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGTTTCAGC ACTGCCTCCT
  TGGCAGCTCT CTTCTGCAGG AGGGATGCTT GGTGGCAGCA TCATTGGCTG ATGTGACTGG
  GGGGTTGAAA GGTGCAGAAG AGCTTCAGGG AGGTGATTTG CTGTGCTGTC CCACCACAGG
  AGTCCACTCT CCTAAACTTG TGTGAGAACA TTTTGGAAGT TTCCAGAAAT AATGGTGAGT
  R
  TTGAAAGACC TATGAGCCAG CTAAATACCA AGGACACTCT TGTATGAGAC TGTATTTATA
  CCTAGCAAGG TTCAGGAAAA AATTGAAAAT AAGTTATTGA AGAAACCTGA ATTAGAAGGT
  ATGGAAAGAA GCTACTTGGG GGCAGAGGAC CCCAAGGAAC CATCTTCTTC AGACTAGGAT
  CATTAGCCAG AATGGTGATG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	PWD/PhJ
ss49080591	NES12443529	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	PWD/PhJ
rs29905152					SNP	A	A	A	A	A	A	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49080591	NES12443529	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:32883741 () rs orientation: forward

Symbol	Name	Function Class
Mylk4	myosin light chain kinase family, member 4	1069 bp downstream
Tssr121998	transcription start site region 121998	1949 bp downstream