rs29905964 SNP Detail

Summary

• ID
  rs29905964
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:32883601 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAAAAATTG CAATGGTCGC
  AATGTCCCCA TTTCCCTTAG TTTTATTGAG CACAGGAAAT GAGGCTAGTG CTGCATGGTG
  ACTGTTCTCA GCTCTTCTGC CCAACTGTGC TCATCACATT AGTGCTCTGG GACTCCTGGA
  AGGTTTCAGC ACTGCCTCCT TGGCAGCTCT CTTCTGCAGG AGGGATGCTT GGTGGCAGCA
  Y
  CATTGGCTGA TGTGACTGGG GGGTTGAAAG GTGCAGAAGA GCTTCAGGGA GGTGATTTGC
  TGTGCTGTCC CACCACAGGA GTCCACTCTC CTAAACTTGT GTGAGAACAT TTTGGAAGTT
  TCCAGAAATA ATGGTGAGTA TTGAAAGACC TATGAGCCAG CTAAATACCA AGGACACTCT
  TGTATGAGAC TGTATTTATA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	MOLF/EiJ	PWD/PhJ
ss49080593	NES12443525	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	MOLF/EiJ	PWD/PhJ
rs29905964					SNP	T	T	T	T	T	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49080593	NES12443525	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:32883601 () rs orientation: forward

Symbol	Name	Function Class
Mylk4	myosin light chain kinase family, member 4	1209 bp downstream