rs29905966 SNP Detail

Summary

• ID
  rs29905966
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:32883479 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCAGCCTAT GCCTTGTTCT
  TGTATCAAAT TCCACCCAGA AGGCAAGTTG TAGGAATCAA GGGGGAGATC TGTTTATTAC
  CTTCAGTGGC TTCTAACTAC TGGAAGCTTT TAGTTGCTCC AGAGAAAAAT TGCAATGGTC
  GCAATGTCCC CATTTCCCTT AGTTTTATTG AGCACAGGAA ATGAGGCTAG TGCTGCATGG
  Y
  GACTGTTCTC AGCTCTTCTG CCCAACTGTG CTCATCACAT TAGTGCTCTG GGACTCCTGG
  AAGGTTTCAG CACTGCCTCC TTGGCAGCTC TCTTCTGCAG GAGGGATGCT TGGTGGCAGC
  ATCATTGGCT GATGTGACTG GGGGGTTGAA AGGTGCAGAA GAGCTTCAGG GAGGTGATTT
  GCTGTGCTGT CCCACCACAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	NOD/ShiLtJ	PWD/PhJ
ss49080595	NES12443519	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	NOD/ShiLtJ	PWD/PhJ
rs29905966					SNP	T	T	T	T	T	T	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49080595	NES12443519	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:32883479 () rs orientation: forward

Symbol	Name	Function Class
Mylk4	myosin light chain kinase family, member 4	1331 bp downstream