rs29905968 SNP Detail

Summary

• ID
  rs29905968
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:32883154 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAACTCCTA GGTTCATGCG
  CTTGATCATC TTGCCTCAAC CTCTTAAGCA GCTGGGATTC CAGGCATGTG TCATGCTACT
  CCATAACAAT CTACTGCTAT GTATAAAGAA CTCAAAGGCC TAGGAGCATA GGCCCTTTAG
  AGTGGCTCTC AGACCTTCTT ATTCCATTAC CTATTGTCCA GCCATTCTTT GAGGATGCTG
  Y
  CACCTGATCC AGCTAGACAG GTGAACCAAG GTTCAATCAT CTTTGCAAGT TCACTTGAGG
  CAGATACTGT CGTATCCATG TTGGGTGAAC CCTCCATACA GGATCATCTG CATGTGCCTC
  ATAATTCAGC CTATGCCTTG TTCTTGTATC AAATTCCACC CAGAAGGCAA GTTGTAGGAA
  TCAAGGGGGA GATCTGTTTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	PWD/PhJ
ss49080597	NES12443513	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	PWD/PhJ
rs29905968					SNP	T	T	T	T	T	T	T	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49080597	NES12443513	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:32883154 () rs orientation: forward

Symbol	Name	Function Class
Mylk4	myosin light chain kinase family, member 4	1656 bp downstream