rs29905969 SNP Detail

Summary

• ID
  rs29905969
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:32882896 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAAATACTG ACTTAATCAG
  TTCTATACCC CAGAAGCTGG GAGGGCACAC CTAAAACTTA GAATCCCTGT CTTCTTTCCC
  TATTTGTTCA AGACCAGAAG CTTTTTAATT AGCATAATAG ATACTACAGT TATTTCTACT
  TGGTAAAATG AGTAGTGTCT AAATTATGTG GACTGGCTAG AAAAGCAGCA CATATGTTTG
  M
  ACCTTTACAT GAAGAATGAG TATAATACAG TAGGAATATA ATTCACGGGC TTCCAGCTCA
  ACTCCTAGGT TCATGCGCTT GATCATCTTG CCTCAACCTC TTAAGCAGCT GGGATTCCAG
  GCATGTGTCA TGCTACTCCA TAACAATCTA CTGCTATGTA TAAAGAACTC AAAGGCCTAG
  GAGCATAGGC CCTTTAGAGT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	MOLF/EiJ	PWD/PhJ
ss49080598	NES12443640	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	MOLF/EiJ	PWD/PhJ
rs29905969					SNP	A	A	A	A	A	A	A	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49080598	NES12443640	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:32882896 () rs orientation: forward

Symbol	Name	Function Class
Mylk4	myosin light chain kinase family, member 4	1914 bp downstream