rs29906756 SNP Detail

Summary

• ID
  rs29906756
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13262528 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGGAGTTAC AGACAGTTGT
  AAGGCACTAT ATGCTGGGAA CTGAGCCCAG GTCCTCTACA AGAGCAGCAA ATGCTCTTGA
  CCACAGAACT GTGTCTTAAG TACCATGCCT TTTAATTCTG GTAAATCCTC ACATTCTCCT
  AGCAACATAG AAATATGACC TATATACAAT AAAACTCACC CACTTGATGT TTCCAGTTTT
  Y
  AGTGGCTCTG CTGTGTGAGC CTCAGAACAG TGTATCTTTC AATGCCCAGA TGGCTGCATG
  ACCCTAAACT CTTCCTCGTG GATGGTCGTC ACACAGAGGC TTTTCAAGGG CAGAGGTGAG
  CATCAGCGTC CTATCCACCG GGTGCTGCGG GTGCTGTTGT TTCTGCTATC ATTGAGGCTG
  TGCTGGGCAT TACTGAGGCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	CAST/EiJ	NOD/ShiLtJ	NZW/LacJ
ss47393816	NES11494962	PERLEGEN	MM_PANEL2	f	SNP	C	C	T	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	CAST/EiJ	NOD/ShiLtJ	NZW/LacJ
rs29906756					SNP	C	C	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47393816	NES11494962	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13262528 () rs orientation: forward

Symbol	Name	Function Class
Gm63815	predicted gene, 63815	within coordinates
Rr368495	regulatory region 368495	939 bp upstream
Rr368496	regulatory region 368496	1444 bp upstream
Rr659886	regulatory region 659886	477 bp proximal
Rr659887	regulatory region 659887	914 bp proximal
Rr659888	regulatory region 659888	1505 bp proximal
Rr659889	regulatory region 659889	1555 bp proximal