rs29910358 SNP Detail

Summary

• ID
  rs29910358
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:3470227 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGCCTACAT AGAGGTTCAA
  CCTTCCATTT ATAACAAAGT CTGGCTGCTG GGGCAGGGTA ACATCATAGT AGAATGCTTG
  CCCAACATAT CCAAGGCCCT GAGTTCTATT CTCAGCAACA CAAAACAATC CCAAATACTC
  CCTCAGTTGG GTTTAGTGGT TCACATGTAT AGTCTCAGCT ACTCCAGAGA TAAAGGTGTG
  R
  GGATTATTTG AGATCATAAG TTCCAGTCTG GACAACACAA CATCTATTAA AAAAAGTCAG
  GGCAGGAAGA TGCCATAGCA GGTAAAGGCA CACCAACTCC AGGCCTGACA ACCTGAGTTT
  GATCTCTAGT CCCCACATGG TGCAAGGAGA GAACCAACTC AAAGTTGTCC TCTGAACCCT
  ACATATTGCA ACTCTAGGTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
ss45376202	mCV23518792	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss146262170	ENSMUSSNP3407939	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A		G
ss320204621	CHEV_2_3386462	CHEVERUD	SCREENING_POP	f	SNP					A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
rs29910358					SNP	G	A	A	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:3470227 () rs orientation: forward

Symbol	Name	Function Class
Gm13184	predicted gene 13184	within coordinates
Suv39h2	suppressor of variegation 3-9 2	within coordinates
Tssr15896	transcription start site region 15896	577 bp downstream