rs29910515 SNP Detail

Summary

• ID
  rs29910515
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:35532685 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TATGT GATAAAACAC CGTTGTCTAA
  Y
  CCGCTATCTG ACTAGACGGG GTGTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss45422075	mCV23378221	ABI	CRAMUS_MOUSE	f	SNP		C					T		C
ss49582222	NES12862002	PERLEGEN	MM_PANEL2	f	SNP	T		C	T	T	C		C	C	T	T	C
ss134771467	ENSMUSSNP4481978	ENSEMBL	ENSEMBL_Sanger	f	SNP		C							C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs29910515					SNP	T	C	C	T	T	C	T	C	C	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49582222	NES12862002	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:35532685 () rs orientation: forward

Symbol	Name	Function Class
Gm65945	predicted gene, 65945	within coordinates
Rr75484	regulatory region 75484	755 bp proximal
Rr75485	regulatory region 75485	1271 bp proximal