rs29911248 SNP Detail

Summary

• ID
  rs29911248
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:95942228 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAGGATGGA AGAATCACAA
  CCACACAAAT CAGGACCTCA GACCTCAGGG GCCTGGACCA CTCTGCACCT GGGAGGCACA
  CGAGGGTTTC GCCCACATCC ATTTATCCCA CGAGAAGGAA GCGCAGACTG AGGAGACACA
  GGGTGTGCCT TGAAGAGCTG CACTCCACCT AGACCCATGC CAGGCAGGGC AGGGTGGTGG
  R
  AGCGTAGCAA GCAAGATCAG AAAGGACAGG AAGCAAAGAC TCAGCAATTA AGTCTATGGG
  GCTGGTTCAC TTGGCCCACT CGGAAGGCAC TCAGTCATAC CATAGCCAGA GACTGCCTAC
  AGCCCATACC GCAGCAGGTA CCATCAACAG GACTTGGCGG CAGAAAGCTC AAGCAGGGTC
  AGAGGTATGC AGTGGGAGGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss39131357	mCV24950488	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss144996092	ENSMUSSNP5783633	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs29911248					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:95942228 () rs orientation: forward

Symbol	Name	Function Class
Iqgap2	IQ motif containing GTPase activating protein 2	within coordinates
Rr277718	regulatory region 277718	628 bp distal
Rr285448	regulatory region 285448	within coordinates