rs29915761 SNP Detail

Summary

• ID
  rs29915761
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:53616364 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGGC GGGGTCGAGG GTACCTGGTC
  R
  GCTGGGATCT CTTGGGCTAG TGGAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss39131701	mCV22985772	ABI	CRAMUS_MOUSE	f	SNP	A	G
ss149017478	ENSMUSSNP5295474	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
ss324342376	CHEV_13_53557697	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs29915761					SNP	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:53616364 () rs orientation: forward

Symbol	Name	Function Class
Cpgi5621	CpG island 5621	within coordinates
Gm33763	predicted gene, 33763	within coordinates
Rr388456	regulatory region 388456	within coordinates
Rr406701	regulatory region 406701	876 bp proximal
Rr480050	regulatory region 480050	207 bp distal
Rr480051	regulatory region 480051	278 bp distal
Rr480052	regulatory region 480052	within coordinates