rs29918094 SNP Detail

Summary

• ID
  rs29918094
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:50912170 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TCTACATCCT TTAAGATAAT GTTCAAGCGT GTGAACCATC AGCATCAAAC AAATGAGGAG
  AAAGGGTGGG GGGCATCCTT CCAGCCCCTT CCAGGTTTGC TTGGGCGGTG CCACACACGT
  CCAGTCCATG TGTTGAATCC TTTGCTTGTG TGACAGCCCT GTCCTCTGAA ATCTTACGCT
  GAAACCTGAT AAATAGAATT TAATACTAAG TAAATTAGGA TGCAATAGGG TGTTGTCTTT
  CAAAAAGTGT TACTCTGAAG ACTCATTCTG AGATATTCTG AGATAATCTT TAAAAAAAAA
  R
  GGTTCAGAAC TGGAAAGTTT GAGAATGCTA CATTAAAGAA GCTTGGGAAG CCCGGCGTGA
  GGGCTCCTCT TCTTAAGTCC TTACCATTGT AGCCGATTAA AGGCTCCTGG GTACCAAAGA
  AATCTGACTG ACTCTGTTCA ATAAAGCATT TTCCAAGCTA ATTTGATGCA AAGGTATCTC
  TTCTATTCAT GTACTAACAC TCCTCAGTGT TCATTAGCAG CAAGCAGCCT TTGGAAAGCC
  TCTGGTTTAA CCTAGAAGAT GAACCGTCAG CACCTCTGGG AATCCCTCCA CCTTGTGTGC
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45874596	mCV23305849	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs29918094					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:50912170 () rs orientation: forward

Symbol	Name	Function Class
Gm31686	predicted gene, 31686	within coordinates
Gm67430	predicted gene, 67430	within coordinates
Rr543	regulatory region 543	within coordinates
Rr399654	regulatory region 399654	1943 bp upstream
Rr630096	regulatory region 630096	1338 bp distal
Rr630097	regulatory region 630097	813 bp distal
Rr630098	regulatory region 630098	552 bp distal
Rr630099	regulatory region 630099	1898 bp proximal