rs29918567 SNP Detail

Summary

• ID
  rs29918567
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13334660 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCACACTAAT CACTATAAAC
  TTGTACCCTA AAAGAAAACT TCAGGATAGC AAGCAAGAAC CTCCAGGTCT ACCCACCGGA
  TAGGTCTCTG GAGCAGCCAC ACTATTATTA TTATTATTAT TATTATTATT ATTGACAAGC
  GTAACACCAC AGAGTGCTGC AAGTCAAGAC ACTGTAGACA TACTCCTGAA GTCAGGATGA
  Y
  GCCTGGGTCT GAGCCATATA ACTCCTAAAG TCACCCTCCA CCCCCAGTGT ATGACAACTT
  AGCTTCACTT ACTGCAAAGA GCCTACGTCA TAGACACAAG TACATCAGGC ACTCACCGAC
  TTTTTGAATG ACCTCTATGT TAGAGAGTGG GCAGAGGTGG AGACAGGGAA ATAATCAGAC
  CCCTCCGATA TATTAAAACT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss47394857	NES11493511	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs29918567					SNP	C	C	C	C	C	C	C	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47394857	NES11493511	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13334660 () rs orientation: forward

Symbol	Name	Function Class
9530085L11Rik	RIKEN cDNA 9530085L11 gene	692 bp downstream
Dcun1d2	defective in cullin neddylation 1 domain containing 2	within coordinates
Gm25014	predicted gene, 25014	1446 bp upstream
Rr659902	regulatory region 659902	1243 bp distal