rs29918570 SNP Detail

Summary

• ID
  rs29918570
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13334669 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCACTATAAA CTTGTACCCT
  AAAAGAAAAC TTCAGGATAG CAAGCAAGAA CCTCCAGGTC TACCCACCGG ATAGGTCTCT
  GGAGCAGCCA CACTATTATT ATTATTATTA TTATTATTAT TATTGACAAG CGTAACACCA
  CAGAGTGCTG CAAGTCAAGA CACTGTAGAC ATACTCCTGA AGTCAGGATG ACGCCTGGGT
  Y
  TGAGCCATAT AACTCCTAAA GTCACCCTCC ACCCCCAGTG TATGACAACT TAGCTTCACT
  TACTGCAAAG AGCCTACGTC ATAGACACAA GTACATCAGG CACTCACCGA CTTTTTGAAT
  GACCTCTATG TTAGAGAGTG GGCAGAGGTG GAGACAGGGA AATAATCAGA CCCCTCCGAT
  ATATTAAAAC TGGCTTATCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss47394860	NES11493512	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C		C	C	T	T		C
ss322505796	CHEV_8_13284669	CHEVERUD	SCREENING_POP	f	SNP											C					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs29918570					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	T	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47394860	NES11493512	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13334669 () rs orientation: forward

Symbol	Name	Function Class
9530085L11Rik	RIKEN cDNA 9530085L11 gene	683 bp downstream
Dcun1d2	defective in cullin neddylation 1 domain containing 2	within coordinates
Gm25014	predicted gene, 25014	1455 bp upstream
Rr659902	regulatory region 659902	1252 bp distal