rs29918887 SNP Detail

Summary

• ID
  rs29918887
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:49658858 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAGGTCAAA AGGAAAGTAG
  TGTGTCTGTA GGGACCAGGA CAGAGGGACC TGAGGTGGGC ACTGCTGGTG GCCTGGAGAC
  TACCACCCAG AACTCAGAAG GCGACGCGGT GGCACCAGGA AGACCTTGCT TCAGTAGTCT
  GGGTTATGCA CTTCTCCTGG TCAAAAATGC GGAACGGTTC CTCCGTGGCA GATTGTATCG
  M
  CACGATAAGC AAAGGCAACT GGTAATTCTT ATAAATGGGG ATTGAACTGT AGAAAGGCGC
  AGGGAAAGAT AAAACTATGT ACTGTTTGGA TTAAGCTTAA ATCTACTGCA AGCAGTTTCA
  AAAGCCAAAG TTGAGGGTTG GAGTCCAAAT ATGTCTTGCA AAACCCTTCT GTGTATAATT
  AGCTTCTTTC TTCAGCCTTC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45377602	mCV25117620	ABI	CRAMUS_MOUSE	f	SNP	A	C	C
ss146526541	ENSMUSSNP6693528	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs29918887					SNP	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:49658858 () rs orientation: forward

Symbol	Name	Function Class
Kif5c	kinesin family member 5C	Intron
Rr556668	regulatory region 556668	202 bp proximal
Rr556669	regulatory region 556669	1702 bp proximal