rs29921721 SNP Detail

Summary

• ID
  rs29921721
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:172890550 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAATT CAATACAAAT TTAAAGTTTG
  K
  TTTTCAGGGG CCCTGCCCTG TGACA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45378022	mCV22952844	ABI	CRAMUS_MOUSE	f	SNP	T	T	G	T
ss148328514	ENSMUSSNP2604368	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		T
ss320621361	CHEV_2_172874258	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29921721					SNP	T	T	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:172890550 () rs orientation: forward

Symbol	Name	Function Class
Gm36337	predicted gene, 36337	925 bp downstream
Gm74627	predicted gene, 74627	within coordinates
Gm74628	predicted gene, 74628	within coordinates
Rr367392	regulatory region 367392	1873 bp downstream
Rr571823	regulatory region 571823	1963 bp distal
Rr571824	regulatory region 571824	within coordinates
Rr571825	regulatory region 571825	783 bp proximal
Rr571826	regulatory region 571826	1358 bp proximal
Rr571827	regulatory region 571827	1791 bp proximal