rs29924448 SNP Detail

Summary

• ID
  rs29924448
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:72534642 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCCTG TGGGGACAGT TTCTCAGTGG
  K
  GGGCAGGACA GAGGCAGCTG GTTGT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45876650	mCV24951535	ABI	CRAMUS_MOUSE	f	SNP	T	T	G
ss133285589	ENSMUSSNP1521285	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	G
ss321822114	CHEV_6_72507653	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs29924448					SNP	T	T	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:72534642 () rs orientation: forward

Symbol	Name	Function Class
Capg	capping actin protein, gelsolin like	within coordinates
Tssr57142	transcription start site region 57142	1856 bp downstream
Tssr57143	transcription start site region 57143	1830 bp downstream
Tssr57144	transcription start site region 57144	1541 bp downstream
Tssr57145	transcription start site region 57145	1501 bp downstream
Tssr57146	transcription start site region 57146	1482 bp downstream
Tssr57147	transcription start site region 57147	316 bp downstream
Tssr57148	transcription start site region 57148	1014 bp upstream
Tssr57149	transcription start site region 57149	1107 bp upstream
Tssr61469	transcription start site region 61469	130 bp downstream