rs29925647 SNP Detail

Summary

• ID
  rs29925647
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:54727449 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGTT GAAAGACCCT TTCACGTCTT
  Y
  GGTGCCAATC TTATCCCATG CTGTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45877550	mCV22832429	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss133205820	ENSMUSSNP5899820	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T
ss321804811	CHEV_6_54700458	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29925647					SNP	T	T	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:54727449 () rs orientation: forward

Symbol	Name	Function Class
Gm66973	predicted gene, 66973	within coordinates
Rr140760	regulatory region 140760	552 bp proximal
Tssr61090	transcription start site region 61090	1434 bp downstream