rs29925673 SNP Detail

Summary

• ID
  rs29925673
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:132292233 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                              ACAAATATAT ATGTTTGTAT
  AGAAGCAAAT CCTCCCAGGA CCACAACTAA CAAGGAGAGA GTCACAATCA TATCAAACTA
  GAATTTCATT ACTAATGTCT TAAATTTCAC TGTATTGCTT TCACATTGTT GCACAAATAC
  CGTGCCCTAT GATTTAGAAC TGAATTATTT CTTTTTCAAT TGTATTAGAA CTTTTCTTCA
  W
  TAACATTTCA AATGTTATCC TGAAAAATCC CTATACTCTC CCATATGCCC TACTTCCCTA
  AACCCACACA CTCCCATTTC TTGATCCTGG TCTTCCCCTC TACTGGGGCA TATAAAGTTT
  CAATGCCAAA AGGCTTGTCT TCTGAATGAT GGCCAAATAG GCCATCTGAG AAACTATGAA
  GCCCCTGGCA AATACAAAAG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45877459	mCV24778873	ABI	CRAMUS_MOUSE	f	SNP	T	A	A	A
ss133730243	ENSMUSSNP617519	ENSEMBL	ENSEMBL_Sanger	r	SNP	A	T		T
ss321965814	CHEV_6_132265288	CHEVERUD	SCREENING_POP	r	SNP					T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29925673					SNP	T	A	A	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:132292233 () rs orientation: reverse

Symbol	Name	Function Class
Prb1b	proline-rich protein BstNI subfamily 1B	527 bp upstream
Tssr2031	transcription start site region 2031	513 bp upstream