rs29926398 SNP Detail

Summary

• ID
  rs29926398
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:82936649 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAAAA TGGATCATAC AGGGAAAAAT
  W
  TTTTTATATA AACACTCCAA GTACT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45877062	mCV23178319	ABI	CRAMUS_MOUSE	f	SNP	T	A	T	T
ss133345782	ENSMUSSNP60997	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A		T
ss321843745	CHEV_6_82909662	CHEVERUD	SCREENING_POP	f	SNP					A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29926398					SNP	T	A	T	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:82936649 () rs orientation: forward

Symbol	Name	Function Class
Gm67812	predicted gene, 67812	535 bp upstream
M1ap	meiosis 1 associated protein	within coordinates
Rr379683	regulatory region 379683	1172 bp downstream
Tssr57263	transcription start site region 57263	541 bp upstream
Tssr57264	transcription start site region 57264	573 bp upstream
Tssr57265	transcription start site region 57265	601 bp upstream
Tssr57266	transcription start site region 57266	872 bp upstream