rs29927701 SNP Detail

Summary

• ID
  rs29927701
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:20646840 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AGGGCAATGA AATGCAGGCT GTGCGTGCGC GCGCGCACAC ACACACACAC ACACACACAC
  ACACACACAA CAAATACACA ACACACACAC ACACCCCTAT ATCTCCTCAC CTCACAAAGG
  AAAGCCATGA CAAACCAAAG TATCAGCGAG TTTTTATTGG GATTACTAAA GGGACTAGGG
  TGAGGGGTTG CTTACAAGAG CAGGGATGAC TCAAAAGCAG CTGCATCCCG GAAAGCCGTC
  CCTGGCACTG GGGAGGACTC AGGCAAGATG CAGCCCTGGG GTTCTCAGCA CAGCTTGCAG
  R
  CAAGAGATTG TTGTCCAAGA GATCACCTAC GCCTATAAAG CTCAGGAAGG GCCTTCAAGA
  ACCTTCAGGT TCCATCTCTG TCAGACTATG ACCTTTCATT TACCCCACAG TCTCATGAGT
  CTCCTCTTGC AATCCTGCGG AAGCTGCCAT GCAGCAGGTG TATATAGGAT TCATTTGTTT
  TGGCCTGGTT CTGAGGATCT GTAGCCCCTC CCCACCTCCA CCCCACCCCC ACTCTCTTTT
  AAAACAGGCG CTAAGACAGG TATGAATGAC TCTTGTGGTT TGCTGAGCTG TGTGTTGTGC
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45378693	mCV25435219	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29927701					SNP	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:20646840 () rs orientation: forward

Symbol	Name	Function Class
Etl4	enhancer trap locus 4	within coordinates
Rr366849	regulatory region 366849	within coordinates