rs29928943 SNP Detail

Summary

• ID
  rs29928943
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:69661604 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAAAT CTGACACTTC TACATAAAGA
  K
  CTTCATAAAA TACTGTTCTA ACAGA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39133561	mCV25146591	ABI	CRAMUS_MOUSE	f	SNP	T	G	T
ss144563372	ENSMUSSNP79937	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		T
ss324404657	CHEV_13_69652363	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29928943					SNP	T	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:69661604 () rs orientation: forward

Symbol	Name	Function Class
Gm48676	predicted gene, 48676	515 bp upstream
Rr277031	regulatory region 277031	1397 bp proximal
Tent4a	terminal nucleotidyltransferase 4A	within coordinates