rs29933196 SNP Detail

Summary

• ID
  rs29933196
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:113610847 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TTCAACTTTG CACACATATC TTGGAGTACC TGCAGAAAAC AGCAAAGCAA AAAGGGACCG
  TTGTTAGAGG AGAGGTTAGG TAGAGGTAGA GCAACAGTGA GGGGGACAGC AGGGTCCAAG
  TGCTCTGAAT GGGAGAAATG TGTGTGGGGT ATTAGCGATC TTTCTAAAAA GGCCTGTATT
  ATGTGCTAAG TCTGTATGAA TATGCATACA TAGTTTACGT GTAAGAGCCA ATGAAAACTC
  CCAACACCAG ACATGAGAAG CCTTCCTTTG AATTATTGGC CAAAGTTGTC CAAGAGACTC
  Y
  TGAAACGTTA CAGGTTATTG CTGTAGTCCT TATTTTGCCC CCTAGAGGAG GAAAGTGGGT
  CCCTATTGTG AATACACAAC ACACTGTCTG TCAGGTACGA GGCCCAGGAA GACCCTTCAC
  TTGAACTCAT CTGAAAGCTC CCTCCCTGAG GAATAGTTTT CGTGGTACCA CAAGGCACCG
  CACAGCTTTC AAGGGAAGGA GTCAACCAAC ATTCCCACCC AGCTATGATG TCTATGAACC
  ACAACAATGA GCAGAAGGAC ACAGTAGCCC TAAGGAGTCA GTAGTGCCAT GCATACCGTG
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46354480	mCV23323117	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29933196					SNP	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:113610847 () rs orientation: forward

Symbol	Name	Function Class
Clasp2	CLIP associating protein 2	within coordinates
Rr192898	regulatory region 192898	within coordinates
Rr192899	regulatory region 192899	1954 bp proximal
Rr202689	regulatory region 202689	742 bp proximal
Rr207498	regulatory region 207498	1954 bp proximal