rs29938875 SNP Detail

Summary

• ID
  rs29938875
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:123270711 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCTTATCTC TCTCGCAGTC
  CTTTTGGCTC GGCACTGGCA GACTTCTGGA TGCCCGTGGA TCTGTACATC GGAGGAAAGG
  AACATGCTGT CATGCACTTG TTCTATGCAC GATTCCTCAG TCATTTTTGC CACGACCAAA
  AGATGGTGAA GCACAGGTGA GCATTCGTTG TACTTTACAA AACAGTTCTG TTCACAAGCA
  R
  TAACTGGAAA CAGGTATCCG TTGGGAATCA AGATAATTTG TGTATACAAA ATAAAATCTG
  TTTTTCATAT ATGCTTTAGA GGCCATTGTA GGTCTTTACA ATTTGAGGTC CATTTACACA
  AACCTCTTAA TCATTTGGTG TGAAATCCGG CTTTCAGTGC ATCTGTCTGT TAAGTAATTT
  GAGGTTTTTA CTTGTAAAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
ss46358686	mCV23337021	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G
ss137077324	ENSMUSSNP2966655	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
rs29938875					SNP	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:123270711 () rs orientation: forward

Symbol	Name	Function Class
Lars2	leucyl-tRNA synthetase, mitochondrial	within coordinates
Rr193658	regulatory region 193658	511 bp distal
Rr203065	regulatory region 203065	678 bp distal
Rr208064	regulatory region 208064	911 bp distal