rs29939228 SNP Detail

Summary

• ID
  rs29939228
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:63691504 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATAAT GCTCTTGCTA AGTATTAACT
  Y
  GAAGAGTTGG TTATCATGTC CATTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46358290	mCV22786518	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	C
ss322983818	CHEV_9_63632029	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29939228					SNP	T	C	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:63691504 () rs orientation: forward

Symbol	Name	Function Class
D9Mit31	DNA segment, Chr 9, Massachusetts Institute of Technology 31	91 bp proximal
D9Mit245	DNA segment, Chr 9, Massachusetts Institute of Technology 245	675 bp proximal
Gm68073	predicted gene, 68073	within coordinates
Rr2253	regulatory region 2253	245 bp distal
Rr2254	regulatory region 2254	within coordinates
Rr196447	regulatory region 196447	1904 bp distal