rs29940156 SNP Detail

Summary

• ID
  rs29940156
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:111255968 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGCT GAGCCCGAAT GTCCAGCTGC
  R
  TTGTGCTGGC TAAGGTTCTT AGACA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46357730	mCV23328705	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss136966978	ENSMUSSNP4651981	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		A
ss323196661	CHEV_9_111329404	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29940156					SNP	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:111255968 () rs orientation: forward

Symbol	Name	Function Class
Rr192826	regulatory region 192826	1233 bp proximal
Rr198795	regulatory region 198795	1633 bp proximal
Rr202627	regulatory region 202627	1431 bp distal
Rr202628	regulatory region 202628	1047 bp proximal
Rr202629	regulatory region 202629	1397 bp proximal