rs29941511 SNP Detail

Summary

• ID
  rs29941511
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:47533578 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CTCAAACCTT GTGGCCTGTT GTTGAAAGTT TTATGGTTTT CCTTAAACCT TATAAAAATA
  CTTAATAAAA AAAATCAGAT AAATAAAGGG GCCTCAGTTT CTTCCTTTAG TTACTGGGTA
  GGAGCCCTTG TTGTATTTTA ATTGTCTTTG GGTTTTATCA AATTCTGGCC CTGTTTGCAG
  AAATGTGCCT TCAGGTATTC CCACTTGCTT GTGAAGGTCT GTGATACCAT AAGCATCAAT
  GACTTCTTAC AGCAATGAGT TCTGTCCCCA GGATTTTTCC AAAATAGAAT TCTTTCTTGG
  R
  AAAAAAAAAA AAGAATAACA CCCTTTCTTG ATTTCTTAAG GGGGAAATTA AGTCAGACTG
  TTGGGAGTCA CCAATGAGTG AGACTTCTCT ATTGTGATAA TGTGACATGA CAGATCCTGT
  AATGGCCATC CCAGGTATTA GCATATTCTA CTGTTTATTA AGCTGAAAAA CATAAACCTT
  TCCTATCATT CCATAACTAA ATATAGCAGT GAAATTTTAT CTCAAGTCAG GAACATTGTC
  CAAATCAGAT TTGATGTGTG TAGGACACTG AACAGTCATT GAGTGGTACA GATTGTGTTA
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46357466	mCV25182053	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29941511					SNP	A	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:47533578 () rs orientation: forward

Symbol	Name	Function Class
Cadm1	cell adhesion molecule 1	within coordinates
Gm70246	predicted gene, 70246	within coordinates
Rr678285	regulatory region 678285	1253 bp proximal
Tssr84930	transcription start site region 84930	1008 bp upstream